Datasets
Flatmap sources held in the Physiome Model Repository (PMR) may be exported as a SPARC Dataset provided a JSON-formatted file describing the sources is referenced from the flatmap’s manifest. The JSON description provides values for the resulting description.xlsx
file in the exported dataset. An example:
{
"title": "Rat flatmap",
"description": "Files for the rat flatmap.",
"species": "NCBITaxon:10114",
"keywords": [
"SPARC",
"flatmap",
"rattus"
],
"contributors": [
{
"name": "Brooks, David",
"orcid": "0000-0002-6758-2186",
"affiliation": "Auckland Bioengineering Institute",
"role": "Creator",
"contact": "Yes"
},
{
"name": "Ebrahimi, Nazanin",
"orcid": "0000-0001-7183-2638",
"affiliation": "Auckland Bioengineering Institute",
"role": "Creator",
"contact": "Yes"
},
{
"name": "Hunter, Peter",
"orcid": "0000-0001-9665-4145",
"affiliation": "Auckland Bioengineering Institute",
"role": "Principle Investigator"
}
],
"funding": "OT3OD025349"
}
The JSON description is referred to in the flatmap’s manifest with the key description
. Assuming the above is saved as description.json
, the manifest would contain:
{
"description": "description.json",
}